Cluster: Rep_3434_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3434
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3434_c_153 | Rep_3434_c_153_3 | 1789 | 2799 | - | 9.A.11.1.1 |
| pfam | Rep_3434_c_153 | Rep_3434_c_153_4 | 2864 | 4552 | - | VanW |
| CAZyme | Rep_3434_c_153 | Rep_3434_c_153_5 | 4932 | 6056 | + | GT28 |
Gene ID: Rep_3434_c_153_3
Type: TC
Location: 1789 - 2799 (-)
Type: TC
Location: 1789 - 2799 (-)
Gene ID: Rep_3434_c_153_4
Type: pfam
Location: 2864 - 4552 (-)
Type: pfam
Location: 2864 - 4552 (-)
Gene ID: Rep_3434_c_153_5
Type: CAZyme
Location: 4932 - 6056 (+)
Type: CAZyme
Location: 4932 - 6056 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp946414115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.