Cluster: Rep_3434_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3434
- CGC Family ID: CGCFAM_03633
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3434_c_151 | Rep_3434_c_151_30 | 29312 | 29968 | + | GT2 |
| NULL(UNKNOWN) | Rep_3434_c_151 | Rep_3434_c_151_31 | 29968 | 30351 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3434_c_151 | Rep_3434_c_151_32 | 30368 | 30922 | + | dTDP_sugar_isom |
| TC | Rep_3434_c_151 | Rep_3434_c_151_33 | 31031 | 32899 | + | 9.B.18.2.1 |
| STP | Rep_3434_c_151 | Rep_3434_c_151_34 | 32948 | 34777 | + | SIS | SIS |
| TC | Rep_3434_c_151 | Rep_3434_c_151_35 | 34804 | 36309 | + | 4.C.1.1.7 |
Gene ID: Rep_3434_c_151_30
Type: CAZyme
Location: 29312 - 29968 (+)
Type: CAZyme
Location: 29312 - 29968 (+)
Gene ID: Rep_3434_c_151_31
Type:
Location: 29968 - 30351 (+)
Type:
Location: 29968 - 30351 (+)
Gene ID: Rep_3434_c_151_32
Type: pfam
Location: 30368 - 30922 (+)
Type: pfam
Location: 30368 - 30922 (+)
Gene ID: Rep_3434_c_151_33
Type: TC
Location: 31031 - 32899 (+)
Type: TC
Location: 31031 - 32899 (+)
Gene ID: Rep_3434_c_151_34
Type: STP
Location: 32948 - 34777 (+)
Type: STP
Location: 32948 - 34777 (+)
Gene ID: Rep_3434_c_151_35
Type: TC
Location: 34804 - 36309 (+)
Type: TC
Location: 34804 - 36309 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp946414115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.