Cluster: Rep_3434_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3434
- CGC Family ID: CGCFAM_09380
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3434_c_144 | Rep_3434_c_144_9 | 7758 | 8636 | - | 3.A.1.1.45 |
| TC | Rep_3434_c_144 | Rep_3434_c_144_10 | 8636 | 9478 | - | 3.A.1.1.45 |
| TC | Rep_3434_c_144 | Rep_3434_c_144_11 | 9581 | 10975 | - | 3.A.1.1.45 |
| CAZyme | Rep_3434_c_144 | Rep_3434_c_144_12 | 11534 | 14359 | + | GH13_19 |
Gene ID: Rep_3434_c_144_9
Type: TC
Location: 7758 - 8636 (-)
Type: TC
Location: 7758 - 8636 (-)
Gene ID: Rep_3434_c_144_10
Type: TC
Location: 8636 - 9478 (-)
Type: TC
Location: 8636 - 9478 (-)
Gene ID: Rep_3434_c_144_11
Type: TC
Location: 9581 - 10975 (-)
Type: TC
Location: 9581 - 10975 (-)
Gene ID: Rep_3434_c_144_12
Type: CAZyme
Location: 11534 - 14359 (+)
Type: CAZyme
Location: 11534 - 14359 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp946414115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.