Cluster: Rep_3432_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3432
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3432_c_0 | Rep_3432_c_0_1392 | 1522950 | 1524233 | - | GH13 |
| pfam | Rep_3432_c_0 | Rep_3432_c_0_1393 | 1524344 | 1524991 | - | Spore_YunB |
| TC | Rep_3432_c_0 | Rep_3432_c_0_1394 | 1525456 | 1526061 | - | 2.A.107.1.2 |
Gene ID: Rep_3432_c_0_1392
Type: CAZyme
Location: 1522950 - 1524233 (-)
Type: CAZyme
Location: 1522950 - 1524233 (-)
Gene ID: Rep_3432_c_0_1393
Type: pfam
Location: 1524344 - 1524991 (-)
Type: pfam
Location: 1524344 - 1524991 (-)
Gene ID: Rep_3432_c_0_1394
Type: TC
Location: 1525456 - 1526061 (-)
Type: TC
Location: 1525456 - 1526061 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.