Cluster: Rep_3432_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3432
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3432_c_0 | Rep_3432_c_0_575 | 681657 | 682649 | + | 9.B.146.1.6 |
| TC | Rep_3432_c_0 | Rep_3432_c_0_576 | 682683 | 683912 | + | 2.A.103.1.3 |
| CAZyme | Rep_3432_c_0 | Rep_3432_c_0_577 | 683983 | 685119 | + | GT28 |
Gene ID: Rep_3432_c_0_575
Type: TC
Location: 681657 - 682649 (+)
Type: TC
Location: 681657 - 682649 (+)
Gene ID: Rep_3432_c_0_576
Type: TC
Location: 682683 - 683912 (+)
Type: TC
Location: 682683 - 683912 (+)
Gene ID: Rep_3432_c_0_577
Type: CAZyme
Location: 683983 - 685119 (+)
Type: CAZyme
Location: 683983 - 685119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.