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Cluster: Rep_3432_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3432_c_0 Rep_3432_c_0_345 413962 415458 + 3.A.1.1.27
TC Rep_3432_c_0 Rep_3432_c_0_346 415455 416318 + 3.A.1.1.27
CAZyme Rep_3432_c_0 Rep_3432_c_0_347 416393 418090 + GH13_36
pfam Rep_3432_c_0 Rep_3432_c_0_348 418432 419523 + TadZ-like_ARD
TC Rep_3432_c_0 Rep_3432_c_0_349 419542 420780 + 3.A.7.15.1
Gene ID: Rep_3432_c_0_345
Type: TC
Location: 413962 - 415458 (+)
Gene ID: Rep_3432_c_0_346
Type: TC
Location: 415455 - 416318 (+)
Gene ID: Rep_3432_c_0_347
Type: CAZyme
Location: 416393 - 418090 (+)
Gene ID: Rep_3432_c_0_348
Type: pfam
Location: 418432 - 419523 (+)
Gene ID: Rep_3432_c_0_349
Type: TC
Location: 419542 - 420780 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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