Cluster: Rep_3432_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3432
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3432_c_0 | Rep_3432_c_0_1773 | 1924697 | 1927327 | - | GH24 |
| pfam | Rep_3432_c_0 | Rep_3432_c_0_1774 | 1927664 | 1928578 | - | PseudoU_synth_2 | S4 |
| TC | Rep_3432_c_0 | Rep_3432_c_0_1775 | 1928571 | 1929056 | - | 9.B.105.1.5 |
Gene ID: Rep_3432_c_0_1773
Type: CAZyme
Location: 1924697 - 1927327 (-)
Type: CAZyme
Location: 1924697 - 1927327 (-)
Gene ID: Rep_3432_c_0_1774
Type: pfam
Location: 1927664 - 1928578 (-)
Type: pfam
Location: 1927664 - 1928578 (-)
Gene ID: Rep_3432_c_0_1775
Type: TC
Location: 1928571 - 1929056 (-)
Type: TC
Location: 1928571 - 1929056 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.