Cluster: Rep_3432_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3432
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3432_c_0 | Rep_3432_c_0_1684 | 1812377 | 1813867 | - | CE4 |
| NULL(UNKNOWN) | Rep_3432_c_0 | Rep_3432_c_0_1685 | 1814282 | 1814710 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3432_c_0 | Rep_3432_c_0_1686 | 1814722 | 1815195 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3432_c_0 | Rep_3432_c_0_1687 | 1815223 | 1817223 | - | 3.A.24.1.1 |
Gene ID: Rep_3432_c_0_1684
Type: CAZyme
Location: 1812377 - 1813867 (-)
Type: CAZyme
Location: 1812377 - 1813867 (-)
Gene ID: Rep_3432_c_0_1685
Type:
Location: 1814282 - 1814710 (-)
Type:
Location: 1814282 - 1814710 (-)
Gene ID: Rep_3432_c_0_1686
Type:
Location: 1814722 - 1815195 (-)
Type:
Location: 1814722 - 1815195 (-)
Gene ID: Rep_3432_c_0_1687
Type: TC
Location: 1815223 - 1817223 (-)
Type: TC
Location: 1815223 - 1817223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.