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Cluster: Rep_3432_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3432_c_0 Rep_3432_c_0_1526 1660824 1662002 + GT4
pfam Rep_3432_c_0 Rep_3432_c_0_1527 1662211 1662549 + DUF6110
TC Rep_3432_c_0 Rep_3432_c_0_1528 1662635 1664731 + 3.A.3.32.3
pfam Rep_3432_c_0 Rep_3432_c_0_1529 1665051 1665887 + VCA0040-like
pfam Rep_3432_c_0 Rep_3432_c_0_1530 1665896 1668049 - Spore_permease | Spore_GerAC
TC Rep_3432_c_0 Rep_3432_c_0_1531 1668039 1669580 - 9.A.11.1.2
Gene ID: Rep_3432_c_0_1526
Type: CAZyme
Location: 1660824 - 1662002 (+)
Gene ID: Rep_3432_c_0_1527
Type: pfam
Location: 1662211 - 1662549 (+)
Gene ID: Rep_3432_c_0_1528
Type: TC
Location: 1662635 - 1664731 (+)
Gene ID: Rep_3432_c_0_1529
Type: pfam
Location: 1665051 - 1665887 (+)
Gene ID: Rep_3432_c_0_1530
Type: pfam
Location: 1665896 - 1668049 (-)
Gene ID: Rep_3432_c_0_1531
Type: TC
Location: 1668039 - 1669580 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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