Cluster: Rep_3432_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3432
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3432_c_0 | Rep_3432_c_0_1454 | 1597801 | 1598820 | - | GH25 |
| NULL(UNKNOWN) | Rep_3432_c_0 | Rep_3432_c_0_1455 | 1598817 | 1598984 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3432_c_0 | Rep_3432_c_0_1456 | 1598987 | 1599187 | - | 1.E.18.1.3 |
Gene ID: Rep_3432_c_0_1454
Type: CAZyme
Location: 1597801 - 1598820 (-)
Type: CAZyme
Location: 1597801 - 1598820 (-)
Gene ID: Rep_3432_c_0_1455
Type:
Location: 1598817 - 1598984 (-)
Type:
Location: 1598817 - 1598984 (-)
Gene ID: Rep_3432_c_0_1456
Type: TC
Location: 1598987 - 1599187 (-)
Type: TC
Location: 1598987 - 1599187 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Pseudoruminococcus
Species
Pseudoruminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.