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Cluster: Rep_3430_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3430_c_18 Rep_3430_c_18_2 2365 3651 + GT28
peptidase Rep_3430_c_18 Rep_3430_c_18_3 3691 4974 + I04.UPW
TC Rep_3430_c_18 Rep_3430_c_18_4 5165 6349 + 4.D.2.1.5
TC Rep_3430_c_18 Rep_3430_c_18_5 6695 8404 + 2.A.103.1.7
Gene ID: Rep_3430_c_18_2
Type: CAZyme
Location: 2365 - 3651 (+)
Gene ID: Rep_3430_c_18_3
Type: peptidase
Location: 3691 - 4974 (+)
Gene ID: Rep_3430_c_18_4
Type: TC
Location: 5165 - 6349 (+)
Gene ID: Rep_3430_c_18_5
Type: TC
Location: 6695 - 8404 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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