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Cluster: Rep_342_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_342_c_1 Rep_342_c_1_121 133306 135429 - GH29
TC Rep_342_c_1 Rep_342_c_1_122 135462 136766 - 3.D.5.1.1
TC Rep_342_c_1 Rep_342_c_1_123 136784 137401 - 3.D.5.1.1
TC Rep_342_c_1 Rep_342_c_1_124 137429 138055 - 3.D.5.1.1
TC Rep_342_c_1 Rep_342_c_1_125 138059 138769 - 3.D.5.1.1
TC Rep_342_c_1 Rep_342_c_1_126 138787 139989 - 3.D.5.1.1
pfam Rep_342_c_1 Rep_342_c_1_127 140024 141367 - NQRA_N | NQRA_SLBB | NQRA_2nd
TC Rep_342_c_1 Rep_342_c_1_128 141808 142632 + 1.A.30.3.1
Gene ID: Rep_342_c_1_121
Type: CAZyme
Location: 133306 - 135429 (-)
Gene ID: Rep_342_c_1_122
Type: TC
Location: 135462 - 136766 (-)
Gene ID: Rep_342_c_1_123
Type: TC
Location: 136784 - 137401 (-)
Gene ID: Rep_342_c_1_124
Type: TC
Location: 137429 - 138055 (-)
Gene ID: Rep_342_c_1_125
Type: TC
Location: 138059 - 138769 (-)
Gene ID: Rep_342_c_1_126
Type: TC
Location: 138787 - 139989 (-)
Gene ID: Rep_342_c_1_127
Type: pfam
Location: 140024 - 141367 (-)
Gene ID: Rep_342_c_1_128
Type: TC
Location: 141808 - 142632 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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