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Cluster: Rep_342_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_342_c_35 Rep_342_c_35_2 223 1164 + GT8
CAZyme Rep_342_c_35 Rep_342_c_35_3 1142 2140 + GT2
NULL(UNKNOWN) Rep_342_c_35 Rep_342_c_35_4 2161 3444 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_342_c_35 Rep_342_c_35_5 3428 4600 + GT4
CAZyme Rep_342_c_35 Rep_342_c_35_6 4578 5828 + GT4
CAZyme Rep_342_c_35 Rep_342_c_35_7 5839 6966 + GT4
NULL(UNKNOWN) Rep_342_c_35 Rep_342_c_35_8 7029 8213 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_342_c_35 Rep_342_c_35_9 8250 8978 + 9.B.18.1.3
Gene ID: Rep_342_c_35_2
Type: CAZyme
Location: 223 - 1164 (+)
Gene ID: Rep_342_c_35_3
Type: CAZyme
Location: 1142 - 2140 (+)
Gene ID: Rep_342_c_35_4
Type:
Location: 2161 - 3444 (+)
Gene ID: Rep_342_c_35_5
Type: CAZyme
Location: 3428 - 4600 (+)
Gene ID: Rep_342_c_35_6
Type: CAZyme
Location: 4578 - 5828 (+)
Gene ID: Rep_342_c_35_7
Type: CAZyme
Location: 5839 - 6966 (+)
Gene ID: Rep_342_c_35_8
Type:
Location: 7029 - 8213 (+)
Gene ID: Rep_342_c_35_9
Type: TC
Location: 8250 - 8978 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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