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Cluster: Rep_342_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_342_c_27 Rep_342_c_27_10 7458 10526 + GH2
peptidase Rep_342_c_27 Rep_342_c_27_11 10544 11794 + U32.001
pfam Rep_342_c_27 Rep_342_c_27_12 11791 12564 - Creatininase
CAZyme Rep_342_c_27 Rep_342_c_27_13 12568 15645 - CE20
pfam Rep_342_c_27 Rep_342_c_27_14 15626 16816 - GlcNAc_2-epim
pfam Rep_342_c_27 Rep_342_c_27_15 16820 17743 - DHDPS
TC Rep_342_c_27 Rep_342_c_27_16 17748 19001 - 2.A.1.14.14
TC Rep_342_c_27 Rep_342_c_27_17 19013 20332 - 2.A.1.7.5
Gene ID: Rep_342_c_27_10
Type: CAZyme
Location: 7458 - 10526 (+)
Gene ID: Rep_342_c_27_11
Type: peptidase
Location: 10544 - 11794 (+)
Gene ID: Rep_342_c_27_12
Type: pfam
Location: 11791 - 12564 (-)
Gene ID: Rep_342_c_27_13
Type: CAZyme
Location: 12568 - 15645 (-)
Gene ID: Rep_342_c_27_14
Type: pfam
Location: 15626 - 16816 (-)
Gene ID: Rep_342_c_27_15
Type: pfam
Location: 16820 - 17743 (-)
Gene ID: Rep_342_c_27_16
Type: TC
Location: 17748 - 19001 (-)
Gene ID: Rep_342_c_27_17
Type: TC
Location: 19013 - 20332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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