dbCAN Logo

Cluster: Rep_342_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_342_c_21 Rep_342_c_21_16 22238 23218 - 2.A.19.5.2
NULL(UNKNOWN) Rep_342_c_21 Rep_342_c_21_17 23449 23784 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_342_c_21 Rep_342_c_21_18 23797 24939 + LRR_5 | LRR_5
TC Rep_342_c_21 Rep_342_c_21_19 25017 25892 - 2.A.7.3.57
CAZyme Rep_342_c_21 Rep_342_c_21_20 25917 27203 - GT4
TC Rep_342_c_21 Rep_342_c_21_21 27203 28576 - 9.B.145.1.2
pfam Rep_342_c_21 Rep_342_c_21_22 28589 30085 - Polysacc_synt
STP Rep_342_c_21 Rep_342_c_21_23 30092 31129 - AAA
CAZyme Rep_342_c_21 Rep_342_c_21_24 31126 32211 - GT9
Gene ID: Rep_342_c_21_16
Type: TC
Location: 22238 - 23218 (-)
Gene ID: Rep_342_c_21_17
Type:
Location: 23449 - 23784 (+)
Gene ID: Rep_342_c_21_18
Type: pfam
Location: 23797 - 24939 (+)
Gene ID: Rep_342_c_21_19
Type: TC
Location: 25017 - 25892 (-)
Gene ID: Rep_342_c_21_20
Type: CAZyme
Location: 25917 - 27203 (-)
Gene ID: Rep_342_c_21_21
Type: TC
Location: 27203 - 28576 (-)
Gene ID: Rep_342_c_21_22
Type: pfam
Location: 28589 - 30085 (-)
Gene ID: Rep_342_c_21_23
Type: STP
Location: 30092 - 31129 (-)
Gene ID: Rep_342_c_21_24
Type: CAZyme
Location: 31126 - 32211 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List