Cluster: Rep_342_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_342
- CGC Family ID: CGCFAM_01752
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_342_c_13 | Rep_342_c_13_2 | 1241 | 8701 | + | 9.A.25.1.1 |
| TC | Rep_342_c_13 | Rep_342_c_13_3 | 8707 | 10563 | + | 3.A.1.120.6 |
| pfam | Rep_342_c_13 | Rep_342_c_13_4 | 10558 | 11280 | - | RadC | UPF0758_N |
| CAZyme | Rep_342_c_13 | Rep_342_c_13_5 | 11277 | 12287 | - | GT2 |
| pfam | Rep_342_c_13 | Rep_342_c_13_6 | 12287 | 13420 | - | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| pfam | Rep_342_c_13 | Rep_342_c_13_7 | 13422 | 15749 | - | UvrD-helicase | Viral_helicase1 | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| TC | Rep_342_c_13 | Rep_342_c_13_8 | 15947 | 18505 | + | 1.C.105.2.12 |
Gene ID: Rep_342_c_13_2
Type: TC
Location: 1241 - 8701 (+)
Type: TC
Location: 1241 - 8701 (+)
Gene ID: Rep_342_c_13_3
Type: TC
Location: 8707 - 10563 (+)
Type: TC
Location: 8707 - 10563 (+)
Gene ID: Rep_342_c_13_4
Type: pfam
Location: 10558 - 11280 (-)
Type: pfam
Location: 10558 - 11280 (-)
Gene ID: Rep_342_c_13_5
Type: CAZyme
Location: 11277 - 12287 (-)
Type: CAZyme
Location: 11277 - 12287 (-)
Gene ID: Rep_342_c_13_6
Type: pfam
Location: 12287 - 13420 (-)
Type: pfam
Location: 12287 - 13420 (-)
Gene ID: Rep_342_c_13_7
Type: pfam
Location: 13422 - 15749 (-)
Type: pfam
Location: 13422 - 15749 (-)
Gene ID: Rep_342_c_13_8
Type: TC
Location: 15947 - 18505 (+)
Type: TC
Location: 15947 - 18505 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp900760855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.