Cluster: Rep_3422_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_217 | 220093 | 221550 | + | 2.A.2.1.1 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_218 | 221746 | 222957 | + | GT4 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_219 | 222954 | 224078 | + | GT4 |
Gene ID: Rep_3422_c_1_217
Type: TC
Location: 220093 - 221550 (+)
Type: TC
Location: 220093 - 221550 (+)
Gene ID: Rep_3422_c_1_218
Type: CAZyme
Location: 221746 - 222957 (+)
Type: CAZyme
Location: 221746 - 222957 (+)
Gene ID: Rep_3422_c_1_219
Type: CAZyme
Location: 222954 - 224078 (+)
Type: CAZyme
Location: 222954 - 224078 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.