Cluster: Rep_3422_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_204 | 206419 | 206700 | + | 1.E.11.1.10 |
| peptidase | Rep_3422_c_1 | Rep_3422_c_1_205 | 206706 | 207560 | + | C51.UPW |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_206 | 208635 | 209609 | + | ROK |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_207 | 209710 | 211077 | + | GH30_4 |
| TC | Rep_3422_c_1 | Rep_3422_c_1_208 | 211228 | 212817 | + | 2.A.2.3.6 |
Gene ID: Rep_3422_c_1_204
Type: TC
Location: 206419 - 206700 (+)
Type: TC
Location: 206419 - 206700 (+)
Gene ID: Rep_3422_c_1_205
Type: peptidase
Location: 206706 - 207560 (+)
Type: peptidase
Location: 206706 - 207560 (+)
Gene ID: Rep_3422_c_1_206
Type: pfam
Location: 208635 - 209609 (+)
Type: pfam
Location: 208635 - 209609 (+)
Gene ID: Rep_3422_c_1_207
Type: CAZyme
Location: 209710 - 211077 (+)
Type: CAZyme
Location: 209710 - 211077 (+)
Gene ID: Rep_3422_c_1_208
Type: TC
Location: 211228 - 212817 (+)
Type: TC
Location: 211228 - 212817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.