dbCAN Logo

Cluster: Rep_3422_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3422_c_1 Rep_3422_c_1_59 66535 67821 + GH27
NULL(UNKNOWN) Rep_3422_c_1 Rep_3422_c_1_60 67876 68445 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3422_c_1 Rep_3422_c_1_61 68524 70500 - GH2
TF Rep_3422_c_1 Rep_3422_c_1_62 70723 71007 + HTH_5
NULL(UNKNOWN) Rep_3422_c_1 Rep_3422_c_1_63 71018 71218 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3422_c_1 Rep_3422_c_1_64 71215 73044 + 3.A.3.6.10
TF Rep_3422_c_1 Rep_3422_c_1_65 73176 73361 + HTH_3
NULL(UNKNOWN) Rep_3422_c_1 Rep_3422_c_1_66 73505 73825 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3422_c_1 Rep_3422_c_1_67 73905 74717 - 3.A.1.3.6
TC Rep_3422_c_1 Rep_3422_c_1_68 74722 75423 - 3.A.1.3.14
TC Rep_3422_c_1 Rep_3422_c_1_69 75577 76419 - 3.A.1.3.10
Gene ID: Rep_3422_c_1_59
Type: CAZyme
Location: 66535 - 67821 (+)
Gene ID: Rep_3422_c_1_60
Type:
Location: 67876 - 68445 (+)
Gene ID: Rep_3422_c_1_61
Type: CAZyme
Location: 68524 - 70500 (-)
Gene ID: Rep_3422_c_1_62
Type: TF
Location: 70723 - 71007 (+)
Gene ID: Rep_3422_c_1_63
Type:
Location: 71018 - 71218 (+)
Gene ID: Rep_3422_c_1_64
Type: TC
Location: 71215 - 73044 (+)
Gene ID: Rep_3422_c_1_65
Type: TF
Location: 73176 - 73361 (+)
Gene ID: Rep_3422_c_1_66
Type:
Location: 73505 - 73825 (+)
Gene ID: Rep_3422_c_1_67
Type: TC
Location: 73905 - 74717 (-)
Gene ID: Rep_3422_c_1_68
Type: TC
Location: 74722 - 75423 (-)
Gene ID: Rep_3422_c_1_69
Type: TC
Location: 75577 - 76419 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List