Cluster: Rep_3422_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- CGC Family ID: CGCFAM_06199
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_31 | 29427 | 32060 | - | 4.A.2.1.17 |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_32 | 32296 | 33651 | + | Hexapep | NTP_transferase | IspD | CTP_transf_3 | NTP_transf_3 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_33 | 33701 | 36160 | - | GH3 |
Gene ID: Rep_3422_c_1_31
Type: TC
Location: 29427 - 32060 (-)
Type: TC
Location: 29427 - 32060 (-)
Gene ID: Rep_3422_c_1_32
Type: pfam
Location: 32296 - 33651 (+)
Type: pfam
Location: 32296 - 33651 (+)
Gene ID: Rep_3422_c_1_33
Type: CAZyme
Location: 33701 - 36160 (-)
Type: CAZyme
Location: 33701 - 36160 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.