Cluster: Rep_3422_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3422_c_0 | Rep_3422_c_0_366 | 373120 | 375576 | + | GT4 |
| pfam | Rep_3422_c_0 | Rep_3422_c_0_367 | 375765 | 379118 | + | SH3_3 |
| peptidase | Rep_3422_c_0 | Rep_3422_c_0_368 | 379212 | 380246 | - | M48.UPW |
| TC | Rep_3422_c_0 | Rep_3422_c_0_369 | 380493 | 381800 | + | 3.A.16.1.1 |
Gene ID: Rep_3422_c_0_366
Type: CAZyme
Location: 373120 - 375576 (+)
Type: CAZyme
Location: 373120 - 375576 (+)
Gene ID: Rep_3422_c_0_367
Type: pfam
Location: 375765 - 379118 (+)
Type: pfam
Location: 375765 - 379118 (+)
Gene ID: Rep_3422_c_0_368
Type: peptidase
Location: 379212 - 380246 (-)
Type: peptidase
Location: 379212 - 380246 (-)
Gene ID: Rep_3422_c_0_369
Type: TC
Location: 380493 - 381800 (+)
Type: TC
Location: 380493 - 381800 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.