Cluster: Rep_3422_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1480 | 1639876 | 1641210 | - | GH29 |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_1481 | 1641212 | 1642057 | - | S6PP | Hydrolase_3 |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_1482 | 1642226 | 1643602 | + | Metallophos |
| TC | Rep_3422_c_1 | Rep_3422_c_1_1483 | 1643653 | 1645131 | + | 2.A.2.1.1 |
Gene ID: Rep_3422_c_1_1480
Type: CAZyme
Location: 1639876 - 1641210 (-)
Type: CAZyme
Location: 1639876 - 1641210 (-)
Gene ID: Rep_3422_c_1_1481
Type: pfam
Location: 1641212 - 1642057 (-)
Type: pfam
Location: 1641212 - 1642057 (-)
Gene ID: Rep_3422_c_1_1482
Type: pfam
Location: 1642226 - 1643602 (+)
Type: pfam
Location: 1642226 - 1643602 (+)
Gene ID: Rep_3422_c_1_1483
Type: TC
Location: 1643653 - 1645131 (+)
Type: TC
Location: 1643653 - 1645131 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.