Cluster: Rep_3422_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3422
- CGC Family ID: CGCFAM_00055
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1382 | 1530166 | 1530942 | - | GT32 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1383 | 1530947 | 1531960 | - | GT2 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1384 | 1531953 | 1532951 | - | GT2 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1385 | 1532953 | 1533936 | - | GT2 |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_1386 | 1533923 | 1534855 | - | PS_pyruv_trans |
| NULL(UNKNOWN) | Rep_3422_c_1 | Rep_3422_c_1_1387 | 1535016 | 1536296 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3422_c_1 | Rep_3422_c_1_1388 | 1536321 | 1537607 | - | 3.A.1.103.5 |
Gene ID: Rep_3422_c_1_1382
Type: CAZyme
Location: 1530166 - 1530942 (-)
Type: CAZyme
Location: 1530166 - 1530942 (-)
Gene ID: Rep_3422_c_1_1383
Type: CAZyme
Location: 1530947 - 1531960 (-)
Type: CAZyme
Location: 1530947 - 1531960 (-)
Gene ID: Rep_3422_c_1_1384
Type: CAZyme
Location: 1531953 - 1532951 (-)
Type: CAZyme
Location: 1531953 - 1532951 (-)
Gene ID: Rep_3422_c_1_1385
Type: CAZyme
Location: 1532953 - 1533936 (-)
Type: CAZyme
Location: 1532953 - 1533936 (-)
Gene ID: Rep_3422_c_1_1386
Type: pfam
Location: 1533923 - 1534855 (-)
Type: pfam
Location: 1533923 - 1534855 (-)
Gene ID: Rep_3422_c_1_1387
Type:
Location: 1535016 - 1536296 (-)
Type:
Location: 1535016 - 1536296 (-)
Gene ID: Rep_3422_c_1_1388
Type: TC
Location: 1536321 - 1537607 (-)
Type: TC
Location: 1536321 - 1537607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.