Cluster: Rep_3422_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_1317 | 1462934 | 1463521 | - | 3.D.1.8.1 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1318 | 1463514 | 1465256 | - | GH2 |
| TC | Rep_3422_c_1 | Rep_3422_c_1_1319 | 1465279 | 1466979 | - | 3.A.1.112.9 |
Gene ID: Rep_3422_c_1_1317
Type: TC
Location: 1462934 - 1463521 (-)
Type: TC
Location: 1462934 - 1463521 (-)
Gene ID: Rep_3422_c_1_1318
Type: CAZyme
Location: 1463514 - 1465256 (-)
Type: CAZyme
Location: 1463514 - 1465256 (-)
Gene ID: Rep_3422_c_1_1319
Type: TC
Location: 1465279 - 1466979 (-)
Type: TC
Location: 1465279 - 1466979 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.