Cluster: Rep_3422_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- CGC Family ID: CGCFAM_00103
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_1232 | 1373966 | 1375606 | + | 2.A.2.3.2 |
| NULL(UNKNOWN) | Rep_3422_c_1 | Rep_3422_c_1_1233 | 1375653 | 1376930 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_1234 | 1376993 | 1377253 | - | DUF6171 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_1235 | 1377253 | 1378728 | - | GH51_1 |
Gene ID: Rep_3422_c_1_1232
Type: TC
Location: 1373966 - 1375606 (+)
Type: TC
Location: 1373966 - 1375606 (+)
Gene ID: Rep_3422_c_1_1233
Type:
Location: 1375653 - 1376930 (-)
Type:
Location: 1375653 - 1376930 (-)
Gene ID: Rep_3422_c_1_1234
Type: pfam
Location: 1376993 - 1377253 (-)
Type: pfam
Location: 1376993 - 1377253 (-)
Gene ID: Rep_3422_c_1_1235
Type: CAZyme
Location: 1377253 - 1378728 (-)
Type: CAZyme
Location: 1377253 - 1378728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.