Cluster: Rep_3422_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- CGC Family ID: CGCFAM_00946
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_924 | 1013498 | 1014133 | + | 4.F.1.1.8 |
| TC | Rep_3422_c_1 | Rep_3422_c_1_925 | 1014162 | 1016489 | + | 3.A.9.1.2 |
| TC | Rep_3422_c_1 | Rep_3422_c_1_926 | 1017337 | 1018980 | - | 8.A.7.1.1 |
| STP | Rep_3422_c_1 | Rep_3422_c_1_927 | 1019009 | 1019266 | - | PTS-HPr |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_928 | 1019302 | 1020957 | - | GH13_29 |
| TC | Rep_3422_c_1 | Rep_3422_c_1_929 | 1020959 | 1022977 | - | 4.A.1.2.13 |
Gene ID: Rep_3422_c_1_924
Type: TC
Location: 1013498 - 1014133 (+)
Type: TC
Location: 1013498 - 1014133 (+)
Gene ID: Rep_3422_c_1_925
Type: TC
Location: 1014162 - 1016489 (+)
Type: TC
Location: 1014162 - 1016489 (+)
Gene ID: Rep_3422_c_1_926
Type: TC
Location: 1017337 - 1018980 (-)
Type: TC
Location: 1017337 - 1018980 (-)
Gene ID: Rep_3422_c_1_927
Type: STP
Location: 1019009 - 1019266 (-)
Type: STP
Location: 1019009 - 1019266 (-)
Gene ID: Rep_3422_c_1_928
Type: CAZyme
Location: 1019302 - 1020957 (-)
Type: CAZyme
Location: 1019302 - 1020957 (-)
Gene ID: Rep_3422_c_1_929
Type: TC
Location: 1020959 - 1022977 (-)
Type: TC
Location: 1020959 - 1022977 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.