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Cluster: Rep_3422_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3422_c_1 Rep_3422_c_1_687 751135 751830 + 3.A.2.1.5
TC Rep_3422_c_1 Rep_3422_c_1_688 751885 752115 + 3.A.2.1.2
pfam Rep_3422_c_1 Rep_3422_c_1_689 752160 752660 + ATP-synt_B
pfam Rep_3422_c_1 Rep_3422_c_1_690 752641 753150 + OSCP
TC Rep_3422_c_1 Rep_3422_c_1_691 753151 754665 + 3.A.2.1.5
TC Rep_3422_c_1 Rep_3422_c_1_692 754658 755545 + 3.A.2.1.5
TC Rep_3422_c_1 Rep_3422_c_1_693 755558 756952 + 3.A.2.1.5
TC Rep_3422_c_1 Rep_3422_c_1_694 756967 757377 + 3.A.2.1.5
pfam Rep_3422_c_1 Rep_3422_c_1_695 757476 758192 + RadC | UPF0758_N
STP Rep_3422_c_1 Rep_3422_c_1_696 758241 759002 - Fer4 | Fer4
CAZyme Rep_3422_c_1 Rep_3422_c_1_697 759113 760588 - GH29
Gene ID: Rep_3422_c_1_687
Type: TC
Location: 751135 - 751830 (+)
Gene ID: Rep_3422_c_1_688
Type: TC
Location: 751885 - 752115 (+)
Gene ID: Rep_3422_c_1_689
Type: pfam
Location: 752160 - 752660 (+)
Gene ID: Rep_3422_c_1_690
Type: pfam
Location: 752641 - 753150 (+)
Gene ID: Rep_3422_c_1_691
Type: TC
Location: 753151 - 754665 (+)
Gene ID: Rep_3422_c_1_692
Type: TC
Location: 754658 - 755545 (+)
Gene ID: Rep_3422_c_1_693
Type: TC
Location: 755558 - 756952 (+)
Gene ID: Rep_3422_c_1_694
Type: TC
Location: 756967 - 757377 (+)
Gene ID: Rep_3422_c_1_695
Type: pfam
Location: 757476 - 758192 (+)
Gene ID: Rep_3422_c_1_696
Type: STP
Location: 758241 - 759002 (-)
Gene ID: Rep_3422_c_1_697
Type: CAZyme
Location: 759113 - 760588 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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