Cluster: Rep_3422_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- CGC Family ID: CGCFAM_01036
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_577 | 628103 | 629572 | + | 3.A.9.1.1 |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_578 | 629577 | 631013 | + | GatB_Yqey | GatB_N |
| TC | Rep_3422_c_1 | Rep_3422_c_1_579 | 631146 | 632144 | + | 9.A.11.1.1 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_580 | 632324 | 633406 | + | GH32 |
Gene ID: Rep_3422_c_1_577
Type: TC
Location: 628103 - 629572 (+)
Type: TC
Location: 628103 - 629572 (+)
Gene ID: Rep_3422_c_1_578
Type: pfam
Location: 629577 - 631013 (+)
Type: pfam
Location: 629577 - 631013 (+)
Gene ID: Rep_3422_c_1_579
Type: TC
Location: 631146 - 632144 (+)
Type: TC
Location: 631146 - 632144 (+)
Gene ID: Rep_3422_c_1_580
Type: CAZyme
Location: 632324 - 633406 (+)
Type: CAZyme
Location: 632324 - 633406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.