Cluster: Rep_3422_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- CGC Family ID: CGCFAM_01013
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_1 | Rep_3422_c_1_381 | 401056 | 401871 | + | 3.A.1.105.18 |
| pfam | Rep_3422_c_1 | Rep_3422_c_1_382 | 401868 | 402584 | + | ABC2_membrane | ABC2_membrane_3 |
| CAZyme | Rep_3422_c_1 | Rep_3422_c_1_383 | 402644 | 404359 | - | GH43_4 |
Gene ID: Rep_3422_c_1_381
Type: TC
Location: 401056 - 401871 (+)
Type: TC
Location: 401056 - 401871 (+)
Gene ID: Rep_3422_c_1_382
Type: pfam
Location: 401868 - 402584 (+)
Type: pfam
Location: 401868 - 402584 (+)
Gene ID: Rep_3422_c_1_383
Type: CAZyme
Location: 402644 - 404359 (-)
Type: CAZyme
Location: 402644 - 404359 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.