Cluster: Rep_3422_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3422
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3422_c_0 | Rep_3422_c_0_103 | 107937 | 110708 | - | 3.A.5.1.3 |
| pfam | Rep_3422_c_0 | Rep_3422_c_0_104 | 111097 | 111675 | + | Cyclase |
| TC | Rep_3422_c_0 | Rep_3422_c_0_105 | 111710 | 112315 | + | 9.B.18.1.2 |
| CAZyme | Rep_3422_c_0 | Rep_3422_c_0_106 | 112356 | 115391 | + | GH2 |
Gene ID: Rep_3422_c_0_103
Type: TC
Location: 107937 - 110708 (-)
Type: TC
Location: 107937 - 110708 (-)
Gene ID: Rep_3422_c_0_104
Type: pfam
Location: 111097 - 111675 (+)
Type: pfam
Location: 111097 - 111675 (+)
Gene ID: Rep_3422_c_0_105
Type: TC
Location: 111710 - 112315 (+)
Type: TC
Location: 111710 - 112315 (+)
Gene ID: Rep_3422_c_0_106
Type: CAZyme
Location: 112356 - 115391 (+)
Type: CAZyme
Location: 112356 - 115391 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.