Cluster: Rep_341_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_341
- CGC Family ID: CGCFAM_11274
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_341_c_127 | Rep_341_c_127_1 | 572 | 2281 | - | 2.A.17.1.6 |
| pfam | Rep_341_c_127 | Rep_341_c_127_2 | 2300 | 2743 | - | SufE |
| peptidase | Rep_341_c_127 | Rep_341_c_127_3 | 2968 | 3966 | - | M28.UNW |
| TC | Rep_341_c_127 | Rep_341_c_127_4 | 4089 | 5753 | - | 4.C.1.1.4 |
| pfam | Rep_341_c_127 | Rep_341_c_127_5 | 5982 | 7298 | + | UPF0004 | Radical_SAM |
| pfam | Rep_341_c_127 | Rep_341_c_127_6 | 7295 | 8254 | + | Lip_A_acyltrans |
| CAZyme | Rep_341_c_127 | Rep_341_c_127_7 | 8232 | 9257 | + | GT2 |
| TC | Rep_341_c_127 | Rep_341_c_127_8 | 9260 | 11917 | - | 3.A.3.2.42 |
| pfam | Rep_341_c_127 | Rep_341_c_127_9 | 11980 | 12594 | - | OMP_b-brl | Phenol_MetA_deg | OMP_b-brl_2 |
| pfam | Rep_341_c_127 | Rep_341_c_127_10 | 12642 | 14660 | - | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | HHH_2 | HHH_5 | HHH_5 | Nlig-Ia |
| TC | Rep_341_c_127 | Rep_341_c_127_11 | 14848 | 16059 | - | 1.B.6.1.6 |
| TC | Rep_341_c_127 | Rep_341_c_127_12 | 16204 | 17415 | - | 1.B.6.1.4 |
Gene ID: Rep_341_c_127_1
Type: TC
Location: 572 - 2281 (-)
Type: TC
Location: 572 - 2281 (-)
Gene ID: Rep_341_c_127_2
Type: pfam
Location: 2300 - 2743 (-)
Type: pfam
Location: 2300 - 2743 (-)
Gene ID: Rep_341_c_127_3
Type: peptidase
Location: 2968 - 3966 (-)
Type: peptidase
Location: 2968 - 3966 (-)
Gene ID: Rep_341_c_127_4
Type: TC
Location: 4089 - 5753 (-)
Type: TC
Location: 4089 - 5753 (-)
Gene ID: Rep_341_c_127_5
Type: pfam
Location: 5982 - 7298 (+)
Type: pfam
Location: 5982 - 7298 (+)
Gene ID: Rep_341_c_127_6
Type: pfam
Location: 7295 - 8254 (+)
Type: pfam
Location: 7295 - 8254 (+)
Gene ID: Rep_341_c_127_7
Type: CAZyme
Location: 8232 - 9257 (+)
Type: CAZyme
Location: 8232 - 9257 (+)
Gene ID: Rep_341_c_127_8
Type: TC
Location: 9260 - 11917 (-)
Type: TC
Location: 9260 - 11917 (-)
Gene ID: Rep_341_c_127_9
Type: pfam
Location: 11980 - 12594 (-)
Type: pfam
Location: 11980 - 12594 (-)
Gene ID: Rep_341_c_127_10
Type: pfam
Location: 12642 - 14660 (-)
Type: pfam
Location: 12642 - 14660 (-)
Gene ID: Rep_341_c_127_11
Type: TC
Location: 14848 - 16059 (-)
Type: TC
Location: 14848 - 16059 (-)
Gene ID: Rep_341_c_127_12
Type: TC
Location: 16204 - 17415 (-)
Type: TC
Location: 16204 - 17415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.