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Cluster: Rep_341_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_341_c_54 Rep_341_c_54_1 3 3206 + 9.A.25.1.1
TC Rep_341_c_54 Rep_341_c_54_2 3212 5068 + 3.A.1.120.6
pfam Rep_341_c_54 Rep_341_c_54_3 5063 5785 - RadC | UPF0758_N
CAZyme Rep_341_c_54 Rep_341_c_54_4 5782 6792 - GT2
pfam Rep_341_c_54 Rep_341_c_54_5 6792 7925 - Orn_DAP_Arg_deC
pfam Rep_341_c_54 Rep_341_c_54_6 7930 10254 - UvrD-helicase | Viral_helicase1 | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
TC Rep_341_c_54 Rep_341_c_54_7 10452 13010 + 1.C.105.2.12
pfam Rep_341_c_54 Rep_341_c_54_8 13023 13880 + Porph_ging
pfam Rep_341_c_54 Rep_341_c_54_9 13877 14719 + Porph_ging
TC Rep_341_c_54 Rep_341_c_54_10 14725 15417 - 2.A.38.4.4
TC Rep_341_c_54 Rep_341_c_54_11 15424 17289 - 2.A.38.4.1
Gene ID: Rep_341_c_54_1
Type: TC
Location: 3 - 3206 (+)
Gene ID: Rep_341_c_54_2
Type: TC
Location: 3212 - 5068 (+)
Gene ID: Rep_341_c_54_3
Type: pfam
Location: 5063 - 5785 (-)
Gene ID: Rep_341_c_54_4
Type: CAZyme
Location: 5782 - 6792 (-)
Gene ID: Rep_341_c_54_5
Type: pfam
Location: 6792 - 7925 (-)
Gene ID: Rep_341_c_54_6
Type: pfam
Location: 7930 - 10254 (-)
Gene ID: Rep_341_c_54_7
Type: TC
Location: 10452 - 13010 (+)
Gene ID: Rep_341_c_54_8
Type: pfam
Location: 13023 - 13880 (+)
Gene ID: Rep_341_c_54_9
Type: pfam
Location: 13877 - 14719 (+)
Gene ID: Rep_341_c_54_10
Type: TC
Location: 14725 - 15417 (-)
Gene ID: Rep_341_c_54_11
Type: TC
Location: 15424 - 17289 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Paramuribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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