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Cluster: Rep_340_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_340_c_0 Rep_340_c_0_2404 2667589 2668746 - 3.B.1.1.2
pfam Rep_340_c_0 Rep_340_c_0_2405 2668795 2669232 - Biotin_lipoyl
pfam Rep_340_c_0 Rep_340_c_0_2406 2669263 2670183 - LTD | OAD_gamma
TC Rep_340_c_0 Rep_340_c_0_2407 2670215 2671768 - 3.B.1.1.2
STP Rep_340_c_0 Rep_340_c_0_2408 2671811 2672233 - Glyoxalase
sulfatase Rep_340_c_0 Rep_340_c_0_2409 2672414 2674000 - S1_11
TC Rep_340_c_0 Rep_340_c_0_2410 2674066 2675346 - 1.A.23.4.5
CAZyme Rep_340_c_0 Rep_340_c_0_2411 2675457 2677634 - GH92
CAZyme Rep_340_c_0 Rep_340_c_0_2412 2677645 2679921 - GH92
Gene ID: Rep_340_c_0_2404
Type: TC
Location: 2667589 - 2668746 (-)
Gene ID: Rep_340_c_0_2405
Type: pfam
Location: 2668795 - 2669232 (-)
Gene ID: Rep_340_c_0_2406
Type: pfam
Location: 2669263 - 2670183 (-)
Gene ID: Rep_340_c_0_2407
Type: TC
Location: 2670215 - 2671768 (-)
Gene ID: Rep_340_c_0_2408
Type: STP
Location: 2671811 - 2672233 (-)
Gene ID: Rep_340_c_0_2409
Type: sulfatase
Location: 2672414 - 2674000 (-)
Gene ID: Rep_340_c_0_2410
Type: TC
Location: 2674066 - 2675346 (-)
Gene ID: Rep_340_c_0_2411
Type: CAZyme
Location: 2675457 - 2677634 (-)
Gene ID: Rep_340_c_0_2412
Type: CAZyme
Location: 2677645 - 2679921 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_340_c_0_2404 vegetarian > vegan 1.77054 0.02695

🧭 Explore Read Mapping of CGC

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