Cluster: Rep_340_CGC28
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_340
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_340_c_0 | Rep_340_c_0_2205 | 2453275 | 2454084 | + | CE4 |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_2206 | 2454081 | 2455055 | + | GT2 |
| pfam | Rep_340_c_0 | Rep_340_c_0_2207 | 2455018 | 2456226 | + | GT87 |
| pfam | Rep_340_c_0 | Rep_340_c_0_2208 | 2456308 | 2456826 | + | Ferritin |
| TC | Rep_340_c_0 | Rep_340_c_0_2209 | 2456907 | 2459723 | - | 1.C.105.2.12 |
| NULL(UNKNOWN) | Rep_340_c_0 | Rep_340_c_0_2210 | 2459881 | 2460324 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_2211 | 2460393 | 2465126 | - | GH2 |
| pfam | Rep_340_c_0 | Rep_340_c_0_2212 | 2465289 | 2466074 | - | Hexapep | Acetyltransf_11 |
| TC | Rep_340_c_0 | Rep_340_c_0_2213 | 2466104 | 2467495 | - | 2.A.6.2.44 |
| TC | Rep_340_c_0 | Rep_340_c_0_2214 | 2467517 | 2470885 | - | 2.A.6.2.22 |
| TC | Rep_340_c_0 | Rep_340_c_0_2215 | 2470930 | 2472105 | - | 2.A.6.2.47 |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_2216 | 2472391 | 2474937 | - | GH84 |
Gene ID: Rep_340_c_0_2205
Type: CAZyme
Location: 2453275 - 2454084 (+)
Type: CAZyme
Location: 2453275 - 2454084 (+)
Gene ID: Rep_340_c_0_2206
Type: CAZyme
Location: 2454081 - 2455055 (+)
Type: CAZyme
Location: 2454081 - 2455055 (+)
Gene ID: Rep_340_c_0_2207
Type: pfam
Location: 2455018 - 2456226 (+)
Type: pfam
Location: 2455018 - 2456226 (+)
Gene ID: Rep_340_c_0_2208
Type: pfam
Location: 2456308 - 2456826 (+)
Type: pfam
Location: 2456308 - 2456826 (+)
Gene ID: Rep_340_c_0_2209
Type: TC
Location: 2456907 - 2459723 (-)
Type: TC
Location: 2456907 - 2459723 (-)
Gene ID: Rep_340_c_0_2210
Type:
Location: 2459881 - 2460324 (+)
Type:
Location: 2459881 - 2460324 (+)
Gene ID: Rep_340_c_0_2211
Type: CAZyme
Location: 2460393 - 2465126 (-)
Type: CAZyme
Location: 2460393 - 2465126 (-)
Gene ID: Rep_340_c_0_2212
Type: pfam
Location: 2465289 - 2466074 (-)
Type: pfam
Location: 2465289 - 2466074 (-)
Gene ID: Rep_340_c_0_2213
Type: TC
Location: 2466104 - 2467495 (-)
Type: TC
Location: 2466104 - 2467495 (-)
Gene ID: Rep_340_c_0_2214
Type: TC
Location: 2467517 - 2470885 (-)
Type: TC
Location: 2467517 - 2470885 (-)
Gene ID: Rep_340_c_0_2215
Type: TC
Location: 2470930 - 2472105 (-)
Type: TC
Location: 2470930 - 2472105 (-)
Gene ID: Rep_340_c_0_2216
Type: CAZyme
Location: 2472391 - 2474937 (-)
Type: CAZyme
Location: 2472391 - 2474937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp000431155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.