Cluster: Rep_340_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_340
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_340_c_0 | Rep_340_c_0_486 | 541680 | 544280 | - | 1.B.14.6.14 |
| pfam | Rep_340_c_0 | Rep_340_c_0_487 | 544243 | 545229 | - | PhoH | AAA_19 | AAA_30 |
| TC | Rep_340_c_0 | Rep_340_c_0_488 | 545375 | 546556 | + | 9.B.97.3.1 |
| STP | Rep_340_c_0 | Rep_340_c_0_489 | 546595 | 547059 | + | CYTH |
| pfam | Rep_340_c_0 | Rep_340_c_0_490 | 547062 | 548474 | - | TRAM | tRNA_U5-meth_tr | Methyltransf_31 |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_491 | 548567 | 551053 | - | GH2 |
| TC | Rep_340_c_0 | Rep_340_c_0_492 | 551298 | 554012 | + | 4.A.2.1.17 |
Gene ID: Rep_340_c_0_486
Type: TC
Location: 541680 - 544280 (-)
Type: TC
Location: 541680 - 544280 (-)
Gene ID: Rep_340_c_0_487
Type: pfam
Location: 544243 - 545229 (-)
Type: pfam
Location: 544243 - 545229 (-)
Gene ID: Rep_340_c_0_488
Type: TC
Location: 545375 - 546556 (+)
Type: TC
Location: 545375 - 546556 (+)
Gene ID: Rep_340_c_0_489
Type: STP
Location: 546595 - 547059 (+)
Type: STP
Location: 546595 - 547059 (+)
Gene ID: Rep_340_c_0_490
Type: pfam
Location: 547062 - 548474 (-)
Type: pfam
Location: 547062 - 548474 (-)
Gene ID: Rep_340_c_0_491
Type: CAZyme
Location: 548567 - 551053 (-)
Type: CAZyme
Location: 548567 - 551053 (-)
Gene ID: Rep_340_c_0_492
Type: TC
Location: 551298 - 554012 (+)
Type: TC
Location: 551298 - 554012 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp000431155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.