Cluster: Rep_340_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_340
- CGC Family ID: CGCFAM_00096
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_340_c_0 | Rep_340_c_0_84 | 102828 | 103877 | + | 9.B.18.2.1 |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_85 | 103898 | 105079 | + | GT4 |
| pfam | Rep_340_c_0 | Rep_340_c_0_86 | 105132 | 106127 | + | EpsG |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_87 | 106132 | 107286 | + | GT4 |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_88 | 107350 | 108330 | + | GT2 |
| CAZyme | Rep_340_c_0 | Rep_340_c_0_89 | 108327 | 109499 | + | GT4 |
Gene ID: Rep_340_c_0_84
Type: TC
Location: 102828 - 103877 (+)
Type: TC
Location: 102828 - 103877 (+)
Gene ID: Rep_340_c_0_85
Type: CAZyme
Location: 103898 - 105079 (+)
Type: CAZyme
Location: 103898 - 105079 (+)
Gene ID: Rep_340_c_0_86
Type: pfam
Location: 105132 - 106127 (+)
Type: pfam
Location: 105132 - 106127 (+)
Gene ID: Rep_340_c_0_87
Type: CAZyme
Location: 106132 - 107286 (+)
Type: CAZyme
Location: 106132 - 107286 (+)
Gene ID: Rep_340_c_0_88
Type: CAZyme
Location: 107350 - 108330 (+)
Type: CAZyme
Location: 107350 - 108330 (+)
Gene ID: Rep_340_c_0_89
Type: CAZyme
Location: 108327 - 109499 (+)
Type: CAZyme
Location: 108327 - 109499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Species
Paramuribaculum sp000431155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.