Cluster: Rep_3396_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3396
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_3 | Rep_3396_c_3_62 | 62051 | 63226 | - | CE9 |
| pfam | Rep_3396_c_3 | Rep_3396_c_3_63 | 63228 | 64097 | - | AP_endonuc_2 |
| CAZyme | Rep_3396_c_3 | Rep_3396_c_3_64 | 64113 | 65147 | - | GH179 |
| peptidase | Rep_3396_c_3 | Rep_3396_c_3_65 | 65330 | 66133 | + | M55.UPW |
| TC | Rep_3396_c_3 | Rep_3396_c_3_66 | 66248 | 67456 | + | 2.A.37.2.2 |
Gene ID: Rep_3396_c_3_62
Type: CAZyme
Location: 62051 - 63226 (-)
Type: CAZyme
Location: 62051 - 63226 (-)
Gene ID: Rep_3396_c_3_63
Type: pfam
Location: 63228 - 64097 (-)
Type: pfam
Location: 63228 - 64097 (-)
Gene ID: Rep_3396_c_3_64
Type: CAZyme
Location: 64113 - 65147 (-)
Type: CAZyme
Location: 64113 - 65147 (-)
Gene ID: Rep_3396_c_3_65
Type: peptidase
Location: 65330 - 66133 (+)
Type: peptidase
Location: 65330 - 66133 (+)
Gene ID: Rep_3396_c_3_66
Type: TC
Location: 66248 - 67456 (+)
Type: TC
Location: 66248 - 67456 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.