Cluster: Rep_3396_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_00538
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3396_c_81 | Rep_3396_c_81_1 | 362 | 1963 | + | 3.A.1.121.4 |
| TC | Rep_3396_c_81 | Rep_3396_c_81_2 | 2407 | 3735 | + | 1.A.26.1.2 |
| CAZyme | Rep_3396_c_81 | Rep_3396_c_81_3 | 3887 | 4876 | + | GH2 |
Gene ID: Rep_3396_c_81_1
Type: TC
Location: 362 - 1963 (+)
Type: TC
Location: 362 - 1963 (+)
Gene ID: Rep_3396_c_81_2
Type: TC
Location: 2407 - 3735 (+)
Type: TC
Location: 2407 - 3735 (+)
Gene ID: Rep_3396_c_81_3
Type: CAZyme
Location: 3887 - 4876 (+)
Type: CAZyme
Location: 3887 - 4876 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.