Cluster: Rep_3396_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_01104
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_77 | Rep_3396_c_77_1 | 2 | 1084 | + | GT4 |
| pfam | Rep_3396_c_77 | Rep_3396_c_77_2 | 1085 | 2653 | + | Wzy_C |
| pfam | Rep_3396_c_77 | Rep_3396_c_77_3 | 2646 | 3482 | + | LicD |
| TC | Rep_3396_c_77 | Rep_3396_c_77_4 | 3475 | 4926 | + | 2.A.66.2.22 |
Gene ID: Rep_3396_c_77_1
Type: CAZyme
Location: 2 - 1084 (+)
Type: CAZyme
Location: 2 - 1084 (+)
Gene ID: Rep_3396_c_77_2
Type: pfam
Location: 1085 - 2653 (+)
Type: pfam
Location: 1085 - 2653 (+)
Gene ID: Rep_3396_c_77_3
Type: pfam
Location: 2646 - 3482 (+)
Type: pfam
Location: 2646 - 3482 (+)
Gene ID: Rep_3396_c_77_4
Type: TC
Location: 3475 - 4926 (+)
Type: TC
Location: 3475 - 4926 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.