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Cluster: Rep_3396_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3396_c_62 Rep_3396_c_62_3 2365 3177 - CE4
pfam Rep_3396_c_62 Rep_3396_c_62_4 4214 5374 - Spore_GerAC
pfam Rep_3396_c_62 Rep_3396_c_62_5 5371 6498 - Spore_permease
TC Rep_3396_c_62 Rep_3396_c_62_6 6498 7994 - 9.A.11.1.2
pfam Rep_3396_c_62 Rep_3396_c_62_7 8095 8772 + DUF421
pfam Rep_3396_c_62 Rep_3396_c_62_8 8769 9140 + DUF4363
CAZyme Rep_3396_c_62 Rep_3396_c_62_9 9200 10480 - GH125
Gene ID: Rep_3396_c_62_3
Type: CAZyme
Location: 2365 - 3177 (-)
Gene ID: Rep_3396_c_62_4
Type: pfam
Location: 4214 - 5374 (-)
Gene ID: Rep_3396_c_62_5
Type: pfam
Location: 5371 - 6498 (-)
Gene ID: Rep_3396_c_62_6
Type: TC
Location: 6498 - 7994 (-)
Gene ID: Rep_3396_c_62_7
Type: pfam
Location: 8095 - 8772 (+)
Gene ID: Rep_3396_c_62_8
Type: pfam
Location: 8769 - 9140 (+)
Gene ID: Rep_3396_c_62_9
Type: CAZyme
Location: 9200 - 10480 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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