Cluster: Rep_3396_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_60 | Rep_3396_c_60_3 | 3577 | 4074 | + | GH27 |
| TC | Rep_3396_c_60 | Rep_3396_c_60_4 | 4258 | 5628 | + | 2.A.66.1.32 |
| pfam | Rep_3396_c_60 | Rep_3396_c_60_5 | 5714 | 6394 | + | NMN_transporter |
| TC | Rep_3396_c_60 | Rep_3396_c_60_6 | 6449 | 8272 | - | 2.A.16.2.2 |
Gene ID: Rep_3396_c_60_3
Type: CAZyme
Location: 3577 - 4074 (+)
Type: CAZyme
Location: 3577 - 4074 (+)
Gene ID: Rep_3396_c_60_4
Type: TC
Location: 4258 - 5628 (+)
Type: TC
Location: 4258 - 5628 (+)
Gene ID: Rep_3396_c_60_5
Type: pfam
Location: 5714 - 6394 (+)
Type: pfam
Location: 5714 - 6394 (+)
Gene ID: Rep_3396_c_60_6
Type: TC
Location: 6449 - 8272 (-)
Type: TC
Location: 6449 - 8272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.