Cluster: Rep_3396_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_31 | Rep_3396_c_31_15 | 12674 | 14065 | - | AA4 |
| TC | Rep_3396_c_31 | Rep_3396_c_31_16 | 14137 | 14994 | - | 3.A.1.24.5 |
| pfam | Rep_3396_c_31 | Rep_3396_c_31_17 | 15011 | 15970 | - | Ldh_1_N | Ldh_1_C |
| TC | Rep_3396_c_31 | Rep_3396_c_31_18 | 15984 | 16664 | - | 3.A.1.24.5 |
| TC | Rep_3396_c_31 | Rep_3396_c_31_19 | 16648 | 17691 | - | 3.A.1.24.3 |
Gene ID: Rep_3396_c_31_15
Type: CAZyme
Location: 12674 - 14065 (-)
Type: CAZyme
Location: 12674 - 14065 (-)
Gene ID: Rep_3396_c_31_16
Type: TC
Location: 14137 - 14994 (-)
Type: TC
Location: 14137 - 14994 (-)
Gene ID: Rep_3396_c_31_17
Type: pfam
Location: 15011 - 15970 (-)
Type: pfam
Location: 15011 - 15970 (-)
Gene ID: Rep_3396_c_31_18
Type: TC
Location: 15984 - 16664 (-)
Type: TC
Location: 15984 - 16664 (-)
Gene ID: Rep_3396_c_31_19
Type: TC
Location: 16648 - 17691 (-)
Type: TC
Location: 16648 - 17691 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3396_c_31_19 | vegetarian > vegan | 1.38654 | 0.00229 |