Cluster: Rep_3396_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_07146
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3396_c_24 | Rep_3396_c_24_6 | 2479 | 3513 | - | 9.B.97.1.9 |
| CAZyme | Rep_3396_c_24 | Rep_3396_c_24_7 | 3603 | 5273 | - | GH123 |
| pfam | Rep_3396_c_24 | Rep_3396_c_24_8 | 5605 | 6270 | + | PepSY |
| TC | Rep_3396_c_24 | Rep_3396_c_24_9 | 6341 | 7882 | - | 2.A.35.2.1 |
Gene ID: Rep_3396_c_24_6
Type: TC
Location: 2479 - 3513 (-)
Type: TC
Location: 2479 - 3513 (-)
Gene ID: Rep_3396_c_24_7
Type: CAZyme
Location: 3603 - 5273 (-)
Type: CAZyme
Location: 3603 - 5273 (-)
Gene ID: Rep_3396_c_24_8
Type: pfam
Location: 5605 - 6270 (+)
Type: pfam
Location: 5605 - 6270 (+)
Gene ID: Rep_3396_c_24_9
Type: TC
Location: 6341 - 7882 (-)
Type: TC
Location: 6341 - 7882 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.