Cluster: Rep_3396_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_22 | Rep_3396_c_22_14 | 11874 | 13007 | + | GH27 |
| NULL(UNKNOWN) | Rep_3396_c_22 | Rep_3396_c_22_15 | 13004 | 13195 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3396_c_22 | Rep_3396_c_22_16 | 13653 | 14765 | + | 1.A.6.2.2 |
| pfam | Rep_3396_c_22 | Rep_3396_c_22_17 | 15011 | 15388 | + | OAD_gamma |
| TC | Rep_3396_c_22 | Rep_3396_c_22_18 | 15421 | 16563 | + | 3.B.1.1.3 |
Gene ID: Rep_3396_c_22_14
Type: CAZyme
Location: 11874 - 13007 (+)
Type: CAZyme
Location: 11874 - 13007 (+)
Gene ID: Rep_3396_c_22_15
Type:
Location: 13004 - 13195 (+)
Type:
Location: 13004 - 13195 (+)
Gene ID: Rep_3396_c_22_16
Type: TC
Location: 13653 - 14765 (+)
Type: TC
Location: 13653 - 14765 (+)
Gene ID: Rep_3396_c_22_17
Type: pfam
Location: 15011 - 15388 (+)
Type: pfam
Location: 15011 - 15388 (+)
Gene ID: Rep_3396_c_22_18
Type: TC
Location: 15421 - 16563 (+)
Type: TC
Location: 15421 - 16563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.