Cluster: Rep_3396_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3396_c_18 | Rep_3396_c_18_14 | 10403 | 11275 | - | 2.A.119.2.1 |
| TF | Rep_3396_c_18 | Rep_3396_c_18_15 | 11399 | 12073 | + | Trans_reg_C |
| STP | Rep_3396_c_18 | Rep_3396_c_18_16 | 12063 | 13562 | + | HATPase_c | HisKA |
| CAZyme | Rep_3396_c_18 | Rep_3396_c_18_17 | 13604 | 14791 | - | GT4 |
Gene ID: Rep_3396_c_18_14
Type: TC
Location: 10403 - 11275 (-)
Type: TC
Location: 10403 - 11275 (-)
Gene ID: Rep_3396_c_18_15
Type: TF
Location: 11399 - 12073 (+)
Type: TF
Location: 11399 - 12073 (+)
Gene ID: Rep_3396_c_18_16
Type: STP
Location: 12063 - 13562 (+)
Type: STP
Location: 12063 - 13562 (+)
Gene ID: Rep_3396_c_18_17
Type: CAZyme
Location: 13604 - 14791 (-)
Type: CAZyme
Location: 13604 - 14791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.