Cluster: Rep_3396_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_05698
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3396_c_18 | Rep_3396_c_18_2 | 279 | 1376 | + | 2.A.45.2.6 |
| sulfatase | Rep_3396_c_18 | Rep_3396_c_18_3 | 1392 | 1973 | + | S1_4 |
| CAZyme | Rep_3396_c_18 | Rep_3396_c_18_4 | 1970 | 3526 | + | GH36 |
| NULL(UNKNOWN) | Rep_3396_c_18 | Rep_3396_c_18_5 | 3608 | 3757 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3396_c_18 | Rep_3396_c_18_6 | 3812 | 4357 | - | QueT |
| TC | Rep_3396_c_18 | Rep_3396_c_18_7 | 4653 | 6035 | + | 2.A.6.4.2 |
| TC | Rep_3396_c_18 | Rep_3396_c_18_8 | 6035 | 6970 | + | 2.A.6.4.2 |
Gene ID: Rep_3396_c_18_2
Type: TC
Location: 279 - 1376 (+)
Type: TC
Location: 279 - 1376 (+)
Gene ID: Rep_3396_c_18_3
Type: sulfatase
Location: 1392 - 1973 (+)
Type: sulfatase
Location: 1392 - 1973 (+)
Gene ID: Rep_3396_c_18_4
Type: CAZyme
Location: 1970 - 3526 (+)
Type: CAZyme
Location: 1970 - 3526 (+)
Gene ID: Rep_3396_c_18_5
Type:
Location: 3608 - 3757 (-)
Type:
Location: 3608 - 3757 (-)
Gene ID: Rep_3396_c_18_6
Type: pfam
Location: 3812 - 4357 (-)
Type: pfam
Location: 3812 - 4357 (-)
Gene ID: Rep_3396_c_18_7
Type: TC
Location: 4653 - 6035 (+)
Type: TC
Location: 4653 - 6035 (+)
Gene ID: Rep_3396_c_18_8
Type: TC
Location: 6035 - 6970 (+)
Type: TC
Location: 6035 - 6970 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.