Cluster: Rep_3396_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_00021
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_17 | Rep_3396_c_17_24 | 20719 | 21879 | + | CE1 |
| pfam | Rep_3396_c_17 | Rep_3396_c_17_25 | 21902 | 23158 | + | GlcNAc_2-epim |
| sulfatase | Rep_3396_c_17 | Rep_3396_c_17_26 | 23191 | 24627 | + | S1_6 |
| TC | Rep_3396_c_17 | Rep_3396_c_17_27 | 24677 | 25603 | + | 3.A.1.1.10 |
| TC | Rep_3396_c_17 | Rep_3396_c_17_28 | 25616 | 26503 | + | 3.A.1.1.29 |
Gene ID: Rep_3396_c_17_24
Type: CAZyme
Location: 20719 - 21879 (+)
Type: CAZyme
Location: 20719 - 21879 (+)
Gene ID: Rep_3396_c_17_25
Type: pfam
Location: 21902 - 23158 (+)
Type: pfam
Location: 21902 - 23158 (+)
Gene ID: Rep_3396_c_17_26
Type: sulfatase
Location: 23191 - 24627 (+)
Type: sulfatase
Location: 23191 - 24627 (+)
Gene ID: Rep_3396_c_17_27
Type: TC
Location: 24677 - 25603 (+)
Type: TC
Location: 24677 - 25603 (+)
Gene ID: Rep_3396_c_17_28
Type: TC
Location: 25616 - 26503 (+)
Type: TC
Location: 25616 - 26503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.