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Cluster: Rep_3396_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3396_c_9 Rep_3396_c_9_35 32041 32880 - 3.A.1.132.3
pfam Rep_3396_c_9 Rep_3396_c_9_36 32971 36462 - FtsX | FtsX | MacB_PCD
TC Rep_3396_c_9 Rep_3396_c_9_37 36476 37180 - 3.A.1.122.7
NULL(UNKNOWN) Rep_3396_c_9 Rep_3396_c_9_38 37305 37457 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3396_c_9 Rep_3396_c_9_39 37627 38628 + HlyD_3 | HlyD_D23
TC Rep_3396_c_9 Rep_3396_c_9_40 38673 39845 + 3.A.1.122.2
NULL(UNKNOWN) Rep_3396_c_9 Rep_3396_c_9_41 39974 40552 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3396_c_9 Rep_3396_c_9_42 40371 41405 - GH177
Gene ID: Rep_3396_c_9_35
Type: TC
Location: 32041 - 32880 (-)
Gene ID: Rep_3396_c_9_36
Type: pfam
Location: 32971 - 36462 (-)
Gene ID: Rep_3396_c_9_37
Type: TC
Location: 36476 - 37180 (-)
Gene ID: Rep_3396_c_9_38
Type:
Location: 37305 - 37457 (-)
Gene ID: Rep_3396_c_9_39
Type: pfam
Location: 37627 - 38628 (+)
Gene ID: Rep_3396_c_9_40
Type: TC
Location: 38673 - 39845 (+)
Gene ID: Rep_3396_c_9_41
Type:
Location: 39974 - 40552 (+)
Gene ID: Rep_3396_c_9_42
Type: CAZyme
Location: 40371 - 41405 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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