Cluster: Rep_3396_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_00999
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3396_c_9 | Rep_3396_c_9_8 | 5415 | 6593 | - | 2.A.4.7.6 |
| pfam | Rep_3396_c_9 | Rep_3396_c_9_9 | 7111 | 8715 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | GHL10 |
| CAZyme | Rep_3396_c_9 | Rep_3396_c_9_10 | 8767 | 9729 | - | GT2 |
Gene ID: Rep_3396_c_9_8
Type: TC
Location: 5415 - 6593 (-)
Type: TC
Location: 5415 - 6593 (-)
Gene ID: Rep_3396_c_9_9
Type: pfam
Location: 7111 - 8715 (+)
Type: pfam
Location: 7111 - 8715 (+)
Gene ID: Rep_3396_c_9_10
Type: CAZyme
Location: 8767 - 9729 (-)
Type: CAZyme
Location: 8767 - 9729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.