Cluster: Rep_3396_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3396
- CGC Family ID: CGCFAM_09953
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3396_c_1 | Rep_3396_c_1_39 | 45038 | 46312 | + | GH3 |
| TC | Rep_3396_c_1 | Rep_3396_c_1_40 | 46488 | 47159 | - | 9.B.143.2.3 |
| TC | Rep_3396_c_1 | Rep_3396_c_1_41 | 47162 | 48967 | - | 2.A.58.2.2 |
| TC | Rep_3396_c_1 | Rep_3396_c_1_42 | 49185 | 49796 | - | 2.A.87.1.3 |
Gene ID: Rep_3396_c_1_39
Type: CAZyme
Location: 45038 - 46312 (+)
Type: CAZyme
Location: 45038 - 46312 (+)
Gene ID: Rep_3396_c_1_40
Type: TC
Location: 46488 - 47159 (-)
Type: TC
Location: 46488 - 47159 (-)
Gene ID: Rep_3396_c_1_41
Type: TC
Location: 47162 - 48967 (-)
Type: TC
Location: 47162 - 48967 (-)
Gene ID: Rep_3396_c_1_42
Type: TC
Location: 49185 - 49796 (-)
Type: TC
Location: 49185 - 49796 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Merdivicinus
Species
Merdivicinus sp900555435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.